![]() Gregg Anazia |
School: University of Mississippi
Major: Biochemistry Mentor: Dr. Susan Pedigo, Assistant Professor of Chemistry Expected Graduation Date: May 2005 Honors & Activities:
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ABSTRACT
Shape vs. Size in Size Exclusion Chromatography
Cadherin is a cell adhesion protein that is significant in
tissue formation.
Crystallographic studies indicate that the extracellular domains of
cadherin
are prolate ellipsoid in shape. The molecular weight of two
cadherin
constructs as determined experimentally using size exclusion
chromatography
(SEC) was approximately twice that of the computed value. This is
misleading given the tendency for cadherin to dimerize in vivo.
Alternatively,
the SEC column was calibrated according to the Stokes radius of the
standard
proteins. Using this revised standard curve, cadherin constructs
appeared to have Stokes radii very similar to that determined
computationally
for these constructs using the program HYDROPRO. Thus,
calibration
of SEC columns according to the Stokes radius yields more reliable
determination
of the size of proteins.
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